Click here to access PB0180 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0180 Q9UBM4 Opticin OPTC OPT Homo_sapiens May be involved in collagen fiber organization via regulation of other members of the small leucine-rich repeat proteoglycan superfamily (By similarity).

DomainsGene Ontology
PF13855 (LRR_8)
GO:0005201 (enables) extracellular matrix structural constituent
GO:0030199 (involved in) collagen fibril organization
GO:0005576 (located in) extracellular region
GO:0031012 (located in) extracellular matrix

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences

Created by Puigbo and Nakamura @ University of Turku (2022)