Click here to access PB0101 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0101 A6NMZ7 Collagen alpha-6(VI) chain COL6A6 collagen type VI alpha 6 chain Homo_sapiens Collagen VI acts as a cell-binding protein.

DomainsGene Ontology
PF00092 (8_VWA)
PF01391 (Collagen)
GO:0030020 (enables) extracellular matrix structural constituent conferring tensile strength
GO:0007155 (involved in) cell adhesion
GO:0030198 (involved in) extracellular matrix organization
GO:0005576 (located in) extracellular region
GO:0031012 (located in) extracellular matrix
GO:0005581 (part of) collagen trimer
GO:0062023 (part of) collagen-containing extracellular matrix

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences

Created by Puigbo and Nakamura @ University of Turku (2022)