Click here to access PB0031 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0031 P21941 Cartilage matrix protein MATN1 matrilin 1, CMP, CRTM Homo_sapiens Cartilage matrix protein is a major component of the extracellular matrix of non-articular cartilage. It binds to collagen.

DomainsGene Ontology
PF00092 (2_VWA)
PF10393 (Matrilin_ccoil)
GO:0005201 (enables) extracellular matrix structural constituent
GO:0005509 (enables) calcium ion binding
GO:0005515 (enables) protein binding
GO:0002062 (involved in) chondrocyte differentiation
GO:0003429 (involved in) growth plate cartilage chondrocyte morphogenesis
GO:0030500 (involved in) regulation of bone mineralization
GO:0065003 (involved in) protein-containing complex assembly
GO:0005576 (located in) extracellular region
GO:0031012 (located in) extracellular matrix
GO:0062023 (located in) collagen-containing extracellular matrix

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences

Created by Puigbo and Nakamura @ University of Turku (2022)