PB0137
DATABASE


Click here to access PB0137 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0137 Q03692 Collagen alpha-1(X) chain COL10A1 collagen type X alpha 1 chain Homo_sapiens Type X collagen is a product of hypertrophic chondrocytes and has been localized to presumptive mineralization zones of hyaline cartilage.

DomainsGene Ontology
PF00386 (C1q)
PF01391 (3_Collagen)
GO:0005201 (enables) extracellular matrix structural constituent
GO:0005515 (enables) protein binding
GO:0030020 (enables) extracellular matrix structural constituent conferring tensile strength
GO:0046872 (enables) metal ion binding
GO:0001501 (involved in) skeletal system development
GO:0030198 (involved in) extracellular matrix organization
GO:0005615 (is active in) extracellular space
GO:0031012 (is active in) extracellular matrix
GO:0005576 (located in) extracellular region
GO:0005599 (located in) collagen type X trimer
GO:0005788 (located in) endoplasmic reticulum lumen
GO:0062023 (located in) collagen-containing extracellular matrix
GO:0005581 (part of) collagen trimer

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)