PB0109
DATABASE


Click here to access PB0109 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0109 O95445 Apolipoprotein M APOM G3a, HSPC336, NG20, apo-M Homo_sapiens Probably involved in lipid transport. Can bind sphingosine-1-phosphate, myristic acid, palmitic acid and stearic acid, retinol, all-trans-retinoic acid and 9-cis-retinoic acid.

DomainsGene Ontology
PF11032 (ApoM)
GO:0005319 (enables) lipid transporter activity
GO:0005543 (enables) phospholipid binding
GO:0016209 (enables) antioxidant activity
GO:0006869 (involved in) lipid transport
GO:0033344 (involved in) cholesterol efflux
GO:0034375 (involved in) high-density lipoprotein particle remodeling
GO:0034380 (involved in) high-density lipoprotein particle assembly
GO:0034384 (involved in) high-density lipoprotein particle clearance
GO:0034445 (involved in) negative regulation of plasma lipoprotein oxidation
GO:0042157 (involved in) lipoprotein metabolic process
GO:0042632 (involved in) cholesterol homeostasis
GO:0043691 (involved in) reverse cholesterol transport
GO:0098869 (involved in) cellular oxidant detoxification
GO:0005576 (located in) extracellular region
GO:0034361 (part of) very-low-density lipoprotein particle
GO:0034362 (part of) low-density lipoprotein particle
GO:0034364 (part of) high-density lipoprotein particle
GO:0034365 (part of) discoidal high-density lipoprotein particle
GO:0034366 (part of) spherical high-density lipoprotein particle

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)