PB0076
DATABASE


Click here to access PB0076 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0076 Q96P44 Collagen alpha-1(XXI) chain COL21A1 COLA1L, FP633, collagen type XXI alpha 1 chain Homo_sapiens

DomainsGene Ontology
PF00092 (VWA)
PF01391 (6_Collagen)
GO:0030020 (enables) extracellular matrix structural constituent conferring tensile strength
GO:0005615 (is active in) extracellular space
GO:0005576 (located in) extracellular region
GO:0005737 (located in) cytoplasm
GO:0005788 (located in) endoplasmic reticulum lumen
GO:0005829 (located in) cytosol
GO:0005581 (part of) collagen trimer
GO:0062023 (part of) collagen-containing extracellular matrix

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)