PB0070
DATABASE


Click here to access PB0070 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0070 Q14112 Nidogen-2 NID2 NID-2 Homo_sapiens Cell adhesion glycoprotein which is widely distributed in basement membranes. Binds to collagens I and IV, to perlecan and to laminin 1. Does not bind fibulins. It probably has a role in cell-extracellular matrix interactions.

DomainsGene Ontology
PF00058 (2_Ldl_recept_b)
PF00086 (2_Thyroglobulin_1)
PF06119 (NIDO)
PF07474 (G2F)
PF07645 (EGF_CA)
PF12662 (cEGF)
PF12947 (EGF_3)
GO:0005201 (enables) extracellular matrix structural constituent
GO:0005509 (enables) calcium ion binding
GO:0005515 (enables) protein binding
GO:0005518 (enables) collagen binding
GO:0007155 (involved in) cell adhesion
GO:0007160 (involved in) cell-matrix adhesion
GO:0071711 (involved in) basement membrane organization
GO:0005615 (is active in) extracellular space
GO:0005576 (located in) extracellular region
GO:0005604 (located in) basement membrane
GO:0005886 (located in) plasma membrane
GO:0031012 (located in) extracellular matrix
GO:0062023 (located in) collagen-containing extracellular matrix
GO:0070062 (located in) extracellular exosome

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)