PB0068
DATABASE


Click here to access PB0068 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0068 P16112 Aggrecan core protein ACAN AGC1, AGCAN, CSPG1, CSPGCP, MSK16, SEDK, SSOAOD, aggrecan Homo_sapiens This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region.

DomainsGene Ontology
PF00059 (Lectin_C)
PF00084 (Sushi)
PF00193 (4_Xlink)
PF07686 (V-set)
GO:0005201 (enables) extracellular matrix structural constituent
GO:0005515 (enables) protein binding
GO:0005540 (enables) hyaluronic acid binding
GO:0030021 (enables) extracellular matrix structural constituent conferring compression resistance
GO:0030246 (enables) carbohydrate binding
GO:0046872 (enables) metal ion binding
GO:0001501 (involved in) skeletal system development
GO:0006508 (involved in) proteolysis
GO:0007155 (involved in) cell adhesion
GO:0007417 (involved in) central nervous system development
GO:0031012 (is active in) extracellular matrix
GO:0005576 (located in) extracellular region
GO:0005796 (located in) Golgi lumen
GO:0043202 (located in) lysosomal lumen
GO:0062023 (located in) collagen-containing extracellular matrix

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)