PB0055
DATABASE


Click here to access PB0055 phyletic profile

PBID Uniprot Name Gene Alternative Organism Uniprot Description
PB0055 P12814 Alpha-actinin-1 ACTN1 BDPLT15, actinin alpha 1 Homo_sapiens F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.

DomainsGene Ontology
PF00307 (2_CH)
PF00435 (4_Spectrin)
PF08726 (EFhand_Ca_insen)
GO:0005884 (colocalizes with) actin filament
GO:0003725 (enables) double-stranded RNA binding
GO:0003779 (enables) actin binding
GO:0005178 (enables) integrin binding
GO:0005509 (enables) calcium ion binding
GO:0005515 (enables) protein binding
GO:0005519 (enables) cytoskeletal regulatory protein binding
GO:0017166 (enables) vinculin binding
GO:0019904 (enables) protein domain specific binding
GO:0030374 (enables) nuclear receptor coactivator activity
GO:0042803 (enables) protein homodimerization activity
GO:0044325 (enables) transmembrane transporter binding
GO:0046872 (enables) metal ion binding
GO:0051015 (enables) actin filament binding
GO:0099186 (enables) structural constituent of postsynapse
GO:0007015 (involved in) actin filament organization
GO:0030036 (involved in) actin cytoskeleton organization
GO:0036344 (involved in) platelet morphogenesis
GO:0042981 (involved in) regulation of apoptotic process
GO:0045893 (involved in) positive regulation of transcription, DNA-templated
GO:0048041 (involved in) focal adhesion assembly
GO:0051017 (involved in) actin filament bundle assembly
GO:0051271 (involved in) negative regulation of cellular component movement
GO:0051639 (involved in) actin filament network formation
GO:0055001 (involved in) muscle cell development
GO:0099173 (involved in) postsynapse organization
GO:0098978 (is active in) glutamatergic synapse
GO:0001725 (located in) stress fiber
GO:0001726 (located in) ruffle
GO:0005576 (located in) extracellular region
GO:0005615 (located in) extracellular space
GO:0005634 (located in) nucleus
GO:0005737 (located in) cytoplasm
GO:0005829 (located in) cytosol
GO:0005856 (located in) cytoskeleton
GO:0005886 (located in) plasma membrane
GO:0005903 (located in) brush border
GO:0005911 (located in) cell-cell junction
GO:0005916 (located in) fascia adherens
GO:0005925 (located in) focal adhesion
GO:0016020 (located in) membrane
GO:0030017 (located in) sarcomere
GO:0030018 (located in) Z disc
GO:0030054 (located in) cell junction
GO:0030864 (located in) cortical actin cytoskeleton
GO:0031093 (located in) platelet alpha granule lumen
GO:0031143 (located in) pseudopodium
GO:0042995 (located in) cell projection
GO:0043197 (located in) dendritic spine
GO:0070062 (located in) extracellular exosome

External Links Description
Intact Open source database system and analysis tools for molecular interaction data.
Protein Atlas An open access resource for human proteins
InterPro (new pfam) InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Seed proteins (Human and Zebrafish)

Selected proteins from model organisms

Mafft alignment of selected proteins

BMGE Cleaned alignment of selected proteins

PhyML tree of selected proteins

BLAST to find more sequences


Created by Puigbo and Nakamura @ University of Turku (2022)